22757 (Tp_Hox6a) zf-CW
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
22757 chr_5 (Tp_Hox6a) zf-CW 1266769 1276503 - zf-CW
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0318
Normalized Mean Residue
Thaps_bicluster_0147
0.38
hypothetical protein
0.878
hypothetical protein
0.8774
COG1204
0.8722
efThoc1 superfamily
0.8665
XRN_N superfamily
0.864
(IKI3) IKI3
0.8596
hypothetical protein
0.8548
Peptidase_S74
0.8545
hypothetical protein
0.8539
DUF2431
0.8526
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
zf-CW superfamily CW-type Zinc Finger; This domain appears to be a zinc finger. The alignment shows four conserved... - 72.4703 9.24E-15 2267 - 2316 superfamily 254236
zf-CW superfamily CW-type Zinc Finger; This domain appears to be a zinc finger. The alignment shows four conserved... - 72.4703 9.24E-15 2267 - 2316 superfamily 254236
SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain; Putative methyl transferase, based on... cl02566 72.3671 4.60E-14 900 - 1026 specific 214614
SET superfamily SET domain; SET domains are protein lysine methyltransferase enzymes. SET domains appear to be... - 72.3671 4.60E-14 900 - 1026 superfamily 261347
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44935 PHATRDRAFT_44935 259554 260181 Not available Cre17.g742700.t1.1 AT4G15180.1 Not available
KEGG description KEGG Pathway
Not available Not available
GO:0005524 GO:0015986 GO:0016469 GO:0046933 GO:0046961 GO:0003677 GO:0006355 GO:0003700 GO:0005634 GO:0008270 GO:0004339 -

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

ATP synthesis coupled proton transport

Details: 
The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
GO Category: 
BP

proton-transporting two-sector ATPase complex

Details: 
A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible.
GO Category: 
CC

proton-transporting ATP synthase activity, rotational mechanism

Details: 
Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism.
GO Category: 
MF

proton-transporting ATPase activity, rotational mechanism

Details: 
Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism.
GO Category: 
MF

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

glucan 1,4-alpha-glucosidase activity

Details: 
Catalysis of the hydrolysis of terminal (1->4)-linked alpha-D-glucose residues successively from non-reducing ends of the chains with release of beta-D-glucose.
GO Category: 
MF
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