PHATRDRAFT_45223 transmembrane protein 30a (CDC50)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45223	chr_6	transmembrane protein 30a (CDC50)	534702	535958	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0362

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0175	0.30	490 6900

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CDC50		LEM3 (ligand-effect modulator 3) family / CDC50 family; Members of this family have been predicted...	cl02095	226.794	3.11E-71	67 - 380	specific	251912
CDC50 superfamily		LEM3 (ligand-effect modulator 3) family / CDC50 family; Members of this family have been predicted...	-	226.794	3.11E-71	67 - 380	superfamily	261172

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3032		Not available	273710	319374	368295	Cre06.g278300.t1.2	AT3G12740.1	285969

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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