3032 CDC50
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3032 chr_2 CDC50 2584012 2585525 - CDC50

Synonyms

NCBI ID Ensembl Genomes exon ID
7452953 Thaps3032.1, Thaps3032.3, Thaps3032.4, Thaps3032.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0204

Most Highly Correlated Transcripts

21193

UBL
0.9006

35136

NA
0.8999

38707

Aldolase_Class_I superfamily
0.8918

bd1934

(bd1934) NA
0.8902

4774

hypothetical protein
0.8866

33348

IGPD superfamily
0.8863

821

(VPS4) AAA
0.8853

11970

NADB_Rossmann superfamily
0.8804

263946

eukaryotic_phosphagen_kinases
0.8794

269624

TIM_phosphate_binding superfamily
0.879

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CDC50 LEM3 (ligand-effect modulator 3) family / CDC50 family; Members of this family have been predicted... cl02095 214.467 1.32E-66 126 - 376 specific 251912
CDC50 superfamily LEM3 (ligand-effect modulator 3) family / CDC50 family; Members of this family have been predicted... - 214.467 1.32E-66 126 - 376 superfamily 261172

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45223 PHATRDRAFT_45223 205710 319374 368295 Cre06.g278300.t1.2 AT1G54320.1 285969

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005554 GO:0016020 -

GO:0005554

NA

Details: 
NA
GO Category: 
NA

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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