PHATRDRAFT_45840 c-type u1 snrnp
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45840 chr_8 c-type u1 snrnp 443812 444462 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0027

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0034
 0.35

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WW Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids;... cl00157 34.4258 0.002277 74 - 103 specific 238122
WW superfamily Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids;... - 34.4258 0.002277 74 - 103 superfamily 260224
zf-U1 superfamily U1 zinc finger; This family consists of several U1 small nuclear ribonucleoprotein C (U1-C)... - 43.5789 1.18E-06 1 - 38 superfamily 267765

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
21280 Not available 268158 288229 Not available Not available Not available 476304

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments