Phatr_hclust_0027 Hierarchical Clustering
Phaeodactylum tricornutum
| Cluster Plot | Conditions Plot | Dendrogram |
|---|---|---|
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| GO ID | Go Term | p-value | q-value | Cluster |
|---|---|---|---|---|
| GO:0006355 | regulation of transcription, DNA-dependent | 0.0000235 | 0.0742442 | Phatr_hclust_0027 |
| GO:0006120 | mitochondrial electron transport, NADH to ubiquinone | 0.0132807 | 1 | Phatr_hclust_0027 |
| GO:0006811 | ion transport | 0.0478862 | 1 | Phatr_hclust_0027 |
| GO:0006397 | mRNA processing | 0.0976524 | 1 | Phatr_hclust_0027 |
| GO:0006812 | cation transport | 0.113688 | 1 | Phatr_hclust_0027 |
| GO:0006310 | DNA recombination | 0.152607 | 1 | Phatr_hclust_0027 |
| GO:0006396 | RNA processing | 0.222148 | 1 | Phatr_hclust_0027 |
| GO:0016567 | protein ubiquitination | 0.276493 | 1 | Phatr_hclust_0027 |
| GO:0006412 | protein biosynthesis | 0.519015 | 1 | Phatr_hclust_0027 |
| GO:0006468 | protein amino acid phosphorylation | 0.542981 | 1 | Phatr_hclust_0027 |
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PHATRDRAFT_24886 : transcription factor protein (HMGB-UBF_HMG-box) |
PHATRDRAFT_13944 : ribonuclease iii (RIBOc superfamily) |
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PHATRDRAFT_39864 : rna binding s1 domain protein (HHH_3) |
PHATRDRAFT_45546 : leucine rich repeat familyexpressed |
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PHATRDRAFT_49160 : (ARM) |
PHATRDRAFT_48683 : ankyrin unc44 (ANK) |
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PHATRDRAFT_45409 : sr protein related family member (rsr-1) (BRLZ) |
PHATRDRAFT_44038 : double-stranded rna-specific editase (A_deamin superfamily) |
PHATRDRAFT_43828 : ion transport protein (Ion_trans) |
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PHATRDRAFT_48573 : telomeric repeat binding factorisoform cra_a (SANT_TRF) |
PHATRDRAFT_37406 : heat shock 105kda 110kda proteinisoform cra_a |
PHATRDRAFT_45840 : c-type u1 snrnp |
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PHATRDRAFT_48046 : tkl family protein kinase (PKc) |
PHATRDRAFT_38338 : heat shock protein hsp70 family protein |
PHATRDRAFT_42995 : enhancer of polycomb-like protein (EPL1 superfamily) |
PHATRDRAFT_54789 : homo sapiensadapter-related protein complex 3 beta 2 subunit (beta-adaptin 3b) (ap-3 complex beta-3b subunit) (beta-3b-adaptin) (neuron-specific vesicle coat protein beta-nap) (Adaptin_N) |
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PHATRDRAFT_31898 : heat shock 105kda 110kda proteinisoform cra_a |
PHATRDRAFT_24006 : mitochondrial intermediate peptidase (GluZincin superfamily) |
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PHATRDRAFT_43944 : nadh dehydrogenase (PLN03132) |
PHATRDRAFT_34252 : heat shock protein hsp70 family protein |
PHATRDRAFT_49557 : heat shock protein (HSF_DNA-bind) |
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PHATRDRAFT_39786 : hsf protein (HSF_DNA-bind) |
PHATRDRAFT_43413 : heat shock transcription factor hsf (HSF_DNA-bind superfamily) |
PHATRDRAFT_49566 : heat shock transcription factor hsf1 (HSF_DNA-bind) |
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PHATRDRAFT_20588 : (Sm_like superfamily) |
PHATRDRAFT_43821 : rad18_schpo postreplication repair e3 ubiquitin-protein ligase rad18 (rad18 homolog) (rad18) |
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PHATRDRAFT_47885 : nadh dehydrogenase (zf-CHCC) |
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PHATRDRAFT_16021 : (SmpB) |
PHATRDRAFT_48570 : rhodanese domain protein (RHOD) |
| Condition | Condition | Difference | FDR |
|---|---|---|---|
| Re-illuminated_6h | Re-illuminated_6h | -1.664 | 0.000505051 |
| Copper_SH | Copper_SH | -0.084 | 0.233477 |
| Green_vs_Red_24h | Green_vs_Red_24h | 0.444 | 0.00178571 |
| Silver_SH | Silver_SH | 0.004 | 0.966393 |
| Cadmium_1.2mg | Cadmium_1.2mg | 0.044 | 0.395781 |
| BlueLight_24h | BlueLight_24h | -0.723 | 0.00128205 |
| GreenLight_0.5h | GreenLight_0.5h | -1.841 | 0.000458716 |
| RedLight_6h | RedLight_6h | -1.805 | 0.000694444 |
| light_16hr_dark_7.5hr | light_16hr_dark_7.5hr | 0.000 | 1 |
| GreenLight_24h | GreenLight_24h | -0.780 | 0.000961538 |
| light_6hr | light_6hr | 0.207 | 0.150184 |
| dark_8hr_light_3hr | dark_8hr_light_3hr | 0.247 | 0.0431953 |
| Blue_vs_Green_6h | Blue_vs_Green_6h | 0.161 | 0.00462963 |
| Ammonia_SH | Ammonia_SH | 0.116 | 0.532751 |
| Simazine_SH | Simazine_SH | -0.225 | 0.00617647 |
| Oil_SH | Oil_SH | -0.207 | 0.00384615 |
| Salinity_15ppt_SH | Salinity_15ppt_SH | 0.094 | 0.227367 |
| Cadmium_SH | Cadmium_SH | -0.196 | 0.0126543 |
| Blue_vs_Red_24h | Blue_vs_Red_24h | 0.501 | 0.00166667 |
| highlight_0to6h | highlight_0to6h | 0.100 | 0.457544 |
| BlueLight_0.5h | BlueLight_0.5h | -1.468 | 0.000462963 |
| Dispersant_SH | Dispersant_SH | -0.035 | 0.661002 |
| light_16hr_dark_4hr | light_16hr_dark_4hr | -0.045 | 0.596247 |
| light_15.5hr | light_15.5hr | -0.121 | 0.466923 |
| light_10.5hr | light_10.5hr | 0.091 | 0.638451 |
| Dispersed_oil_SH | Dispersed_oil_SH | -0.170 | 0.0285714 |
| Si_free | Si_free | 0.001 | 0.988477 |
| Re-illuminated_0.5h | Re-illuminated_0.5h | -1.432 | 0.000396825 |
| Mixture_SH | Mixture_SH | 0.029 | 0.907531 |
| Blue_vs_Red_6h | Blue_vs_Red_6h | 0.107 | 0.465046 |
| light_16hr_dark_30min | light_16hr_dark_30min | -0.110 | 0.517468 |
| BlueLight_6h | BlueLight_6h | -1.698 | 0.000581395 |
| highlight_12to48h | highlight_12to48h | 0.177 | 0.188353 |
| RedLight_24h | RedLight_24h | -1.223 | 0.000943396 |
| Dark_treated | Dark_treated | -0.380 | 0.35264 |
| GreenLight_6h | GreenLight_6h | -1.859 | 0.000609756 |
| Cadmium_0.12mg | Cadmium_0.12mg | 0.030 | 0.252761 |
| Blue_vs_Green_24h | Blue_vs_Green_24h | 0.057 | 0.256173 |
| RedLight_0.5h | RedLight_0.5h | -2.090 | 0.000555556 |
| Green_vs_Red_6h | Green_vs_Red_6h | -0.054 | 0.762423 |
| Re-illuminated_24h | Re-illuminated_24h | -1.108 | 0.000657895 |
