PHATRDRAFT_46270 (START_2)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46270	chr_9	(START_2)	767568	768767	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0399

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0128	0.39	88 190

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
START_2		Uncharacterized subgroup of the steroidogenic acute regulatory protein (StAR)-related lipid...	cl14643	246.443	6.57E-80	115 - 343	specific	176886
SRPBCC superfamily		START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily; SRPBCC domains...	-	246.443	6.57E-80	115 - 343	superfamily	265438

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
22070		Not available	179309	289925	Not available	Not available	Not available	479879

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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