PHATRDRAFT_47067 phosphoribosylglycinamidephosphoribosylglycinamidephosphoribosylaminoimidazole synthetase (PRK00885)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47067 chr_12 phosphoribosylglycinamidephosphoribosylglycinamidephosphoribosylaminoimidazole synthetase (PRK00885) 315757 319539 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0148

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0152
 0.19

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PurM PurM (Aminoimidazole Ribonucleotide [AIR] synthetase), one of eleven enzymes required for purine... cl10019 476.967 3.87E-158 925 - 1215 specific 100032
PurM-like superfamily AIR (aminoimidazole ribonucleotide) synthase related protein. This family includes Hydrogen... - 476.967 3.87E-158 925 - 1215 superfamily 263946
FMT_core_GART Phosphoribosylglycinamide formyltransferase (GAR transformylase, GART); Phosphoribosylglycinamide... cl00395 218.796 6.86E-65 700 - 886 specific 187714
FMT_core superfamily Formyltransferase, catalytic core domain; Formyltransferase, catalytic core domain. The proteins of... - 218.796 6.86E-65 700 - 886 superfamily 260403
GARS_A Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase... cl17255 307.646 1.31E-96 366 - 559 specific 250341
ATP-grasp_4 superfamily ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent... - 307.646 1.31E-96 366 - 559 superfamily 266590
GARS_N superfamily Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase catalyses the... - 127.164 8.36E-34 263 - 365 superfamily 251569
GARS_N superfamily Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase catalyses the... - 127.164 8.36E-34 263 - 365 superfamily 251569
GARS_C superfamily Phosphoribosylglycinamide synthetase, C domain; Phosphoribosylglycinamide synthetase catalyses the... - 104.161 6.76E-26 594 - 694 superfamily 251568
GARS_C superfamily Phosphoribosylglycinamide synthetase, C domain; Phosphoribosylglycinamide synthetase catalyses the... - 104.161 6.76E-26 594 - 694 superfamily 251568

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
26492 Not available 209097 256401 455883 Cre18.g749497.t1.1 AT1G09830.1 285180

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments