Phatr_hclust_0148 Hierarchical Clustering
Phaeodactylum tricornutum
| Cluster Plot | Conditions Plot | Dendrogram |
|---|---|---|
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| GO ID | Go Term | p-value | q-value | Cluster |
|---|---|---|---|---|
| GO:0006207 | 'de novo' pyrimidine base biosynthesis | 0.000652223 | 1 | Phatr_hclust_0148 |
| GO:0006422 | aspartyl-tRNA aminoacylation | 0.00160864 | 1 | Phatr_hclust_0148 |
| GO:0006520 | amino acid metabolism | 0.00193342 | 1 | Phatr_hclust_0148 |
| GO:0006265 | DNA topological change | 0.0037833 | 1 | Phatr_hclust_0148 |
| GO:0006259 | DNA metabolism | 0.00679721 | 1 | Phatr_hclust_0148 |
| GO:0009058 | biosynthesis | 0.0116118 | 1 | Phatr_hclust_0148 |
| GO:0006350 | transcription | 0.0203596 | 1 | Phatr_hclust_0148 |
| GO:0006525 | arginine metabolism | 0.0211296 | 1 | Phatr_hclust_0148 |
| GO:0006430 | lysyl-tRNA aminoacylation | 0.0211296 | 1 | Phatr_hclust_0148 |
| GO:0009113 | purine base biosynthesis | 0.0211296 | 1 | Phatr_hclust_0148 |
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PHATRDRAFT_32550 : cox10cytochrome c oxidase assemblyheme a: farnesyltransferase (PT_UbiA_Cox10) |
PHATRDRAFT_46908 : integral membrane protein (PI-PLCc_GDPD_SF superfamily) |
PHATRDRAFT_40200 : gtp-binding protein (PRK13796) |
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PHATRDRAFT_25183 : carbamoyl-phosphate synthetaseaspartateand dihydroorotase (PLN02527) |
PHATRDRAFT_50302 : spermatogenesis associated |
PHATRDRAFT_4025 : dihydrodipicolinate reductase family protein (PLN02775) |
PHATRDRAFT_24772 : alpha-isopropylmalate isomerase (IPMI) |
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PHATRDRAFT_30514 : ornithine transcarbamylase (PLN02342) |
PHATRDRAFT_47067 : phosphoribosylglycinamidephosphoribosylglycinamidephosphoribosylaminoimidazole synthetase (PRK00885) |
PHATRDRAFT_33633 : dna gyrase subunit a (PRK05560) |
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PHATRDRAFT_43222 : carbamoyltransferase (BcrAD_BadFG superfamily) |
PHATRDRAFT_43029 : (TFIIS_M) |
PHATRDRAFT_48391 : jmj4_schpo jumonji domain-containing protein 4 (meiotically up-regulated gene 149 protein) (Cupin_8) |
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PHATRDRAFT_49522 : cog3195: uncharacterized protein conserved in bacteria (OHCU_decarbox superfamily) |
PHATRDRAFT_48756 : pseudouridine synthase rlu family protein (PseudoU_synth_RluCD_like) |
PHATRDRAFT_13538 : solute carrier familymember 36 (Mito_carr) |
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PHATRDRAFT_18241 : adaptor-related protein complexmu 1 subunit (AP-3_Mu3_Cterm) |
PHATRDRAFT_32202 : lysyl-trna synthetase (lysS) |
PHATRDRAFT_7664 : shikimate 5-dehydrogenase (NAD_bind_Shikimate_DH) |
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PHATRDRAFT_47829 : rieske (2fe-2s) region (Rieske superfamily) |
PHATRDRAFT_23472 : loc539613 protein |
PHATRDRAFT_49134 : (DUF2428 superfamily) |
PHATRDRAFT_49783 : sam-dependent methyltransferase-like protein |
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PHATRDRAFT_18551 : serine carboxypeptidase ii (Peptidase_S10) |
PHATRDRAFT_13581 : dna topoisomerase ii (PLN03128) |
PHATRDRAFT_2271 : gtp-binding protein (PRK00093) |
PHATRDRAFT_22803 : atp-binding protein of abc transporter (ABCD_peroxisomal_ALDP) |
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PHATRDRAFT_42051 : gene product (PLN02850) |
PHATRDRAFT_24238 : carbamate kinase (AAK_CK) |
PHATRDRAFT_43285 : (DUF3727 superfamily) |
PHATRDRAFT_17555 : mitochondrial carrier protein (Mito_carr) |
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PHATRDRAFT_22597 : rna polymeraseii and iia subunit (RNA_pol_Rpb8 superfamily) |
PHATRDRAFT_23059 : aspartatemitochondrial precursor (Aminotran_1_2) |
PHATRDRAFT_3140 : histidinol dehydrogenase (NTP-PPase_His4) |
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PHATRDRAFT_45306 : (PLDc_SF superfamily) |
PHATRDRAFT_49533 : plastidic atp adp transporter (TLC) |
| Condition | Condition | Difference | FDR |
|---|---|---|---|
| Re-illuminated_6h | Re-illuminated_6h | -0.295 | 0.0337696 |
| Copper_SH | Copper_SH | 0.195 | 0.0140625 |
| Green_vs_Red_24h | Green_vs_Red_24h | 0.008 | 0.958639 |
| Silver_SH | Silver_SH | 0.100 | 0.158388 |
| Cadmium_1.2mg | Cadmium_1.2mg | -0.138 | 0.00104167 |
| BlueLight_24h | BlueLight_24h | 0.182 | 0.0878049 |
| GreenLight_0.5h | GreenLight_0.5h | -1.320 | 0.000458716 |
| RedLight_6h | RedLight_6h | -0.440 | 0.00240964 |
| light_16hr_dark_7.5hr | light_16hr_dark_7.5hr | 0.000 | 1 |
| GreenLight_24h | GreenLight_24h | 0.037 | 0.87877 |
| light_6hr | light_6hr | -1.249 | 0.000561798 |
| dark_8hr_light_3hr | dark_8hr_light_3hr | -0.743 | 0.00060241 |
| Blue_vs_Green_6h | Blue_vs_Green_6h | -0.058 | 0.448649 |
| Ammonia_SH | Ammonia_SH | 2.135 | 0.000344828 |
| Simazine_SH | Simazine_SH | 0.057 | 0.515537 |
| Oil_SH | Oil_SH | 0.282 | 0.000666667 |
| Salinity_15ppt_SH | Salinity_15ppt_SH | -0.067 | 0.422222 |
| Cadmium_SH | Cadmium_SH | -0.116 | 0.1769 |
| Blue_vs_Red_24h | Blue_vs_Red_24h | 0.153 | 0.163072 |
| highlight_0to6h | highlight_0to6h | 0.207 | 0.0193396 |
| BlueLight_0.5h | BlueLight_0.5h | -2.265 | 0.000462963 |
| Dispersant_SH | Dispersant_SH | 0.004 | 0.970757 |
| light_16hr_dark_4hr | light_16hr_dark_4hr | 0.066 | 0.464053 |
| light_15.5hr | light_15.5hr | 0.078 | 0.680633 |
| light_10.5hr | light_10.5hr | -1.224 | 0.000561798 |
| Dispersed_oil_SH | Dispersed_oil_SH | 0.096 | 0.221951 |
| Si_free | Si_free | 0.032 | 0.739286 |
| Re-illuminated_0.5h | Re-illuminated_0.5h | -2.278 | 0.000396825 |
| Mixture_SH | Mixture_SH | 1.904 | 0.000357143 |
| Blue_vs_Red_6h | Blue_vs_Red_6h | 0.052 | 0.79902 |
| light_16hr_dark_30min | light_16hr_dark_30min | 0.326 | 0.0351724 |
| BlueLight_6h | BlueLight_6h | -0.388 | 0.000581395 |
| highlight_12to48h | highlight_12to48h | 0.795 | 0.000555556 |
| RedLight_24h | RedLight_24h | 0.029 | 0.842421 |
| Dark_treated | Dark_treated | -2.543 | 0.000446429 |
| GreenLight_6h | GreenLight_6h | -0.330 | 0.00598592 |
| Cadmium_0.12mg | Cadmium_0.12mg | 0.003 | 0.964365 |
| Blue_vs_Green_24h | Blue_vs_Green_24h | 0.145 | 0.00487805 |
| RedLight_0.5h | RedLight_0.5h | -0.089 | 0.80516 |
| Green_vs_Red_6h | Green_vs_Red_6h | 0.110 | 0.474887 |
| Re-illuminated_24h | Re-illuminated_24h | 0.286 | 0.00119048 |
