PHATRDRAFT_47152 rhamnose biosynthetic enzymeexpressed (dTDP_GD_SDR_e)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47152 chr_12 rhamnose biosynthetic enzymeexpressed (dTDP_GD_SDR_e) 629230 630793 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0096

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0176
 0.24

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
dTDP_GD_SDR_e dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs; This subgroup contains dTDP-D-glucose 4,6-... cl09931 459.707 5.87E-161 82 - 397 specific 187557
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 459.707 5.87E-161 82 - 397 superfamily 263925
RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] - 392.36 4.20E-134 82 - 414 multi-dom 224013

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
41045 Not available 176468 249678 367182 Cre02.g083800.t2.1 AT1G53500.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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