PHATRDRAFT_47328 (SAP)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47328 chr_13 (SAP) 308790 310016 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0216

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0047
 0.27

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SAP SAP domain; The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding domain... cl02640 48.9176 5.28E-08 365 - 394 specific 251054
SAP superfamily SAP domain; The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding domain... - 48.9176 5.28E-08 365 - 394 superfamily 261387
alpha-crystallin-Hsps_p23-like superfamily alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a... - 48.3126 2.17E-07 76 - 172 superfamily 260235

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
24217 Not available 181258 320665 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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