PHATRDRAFT_48434
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_48434 chr_17 460367 463613 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0097

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0086
 0.15

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 WD domain, G-beta repeat; WD domain, G-beta repeat. cl02567 40.0343 0.000248331 124 - 152 specific 249832
WD40 superfamily WD domain, G-beta repeat; WD domain, G-beta repeat. - 40.0343 0.000248331 124 - 152 superfamily 261348
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 40.396 0.00166928 127 - 374 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 43.5387 0.000208049 128 - 392 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23064 Not available 249593 147498 Not available Not available Not available 531138

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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