PHATRDRAFT_48959 (Sec10 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_48959 chr_20 (Sec10 superfamily) 148915 153862 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0062

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0033
 0.42

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Sec10 superfamily Exocyst complex component Sec10; This family contains the Sec10 component (approximately 650... - 84.3081 1.14E-16 320 - 1122 superfamily 254184
AhpC-TSA_2 AhpC/TSA antioxidant enzyme; This family contains proteins related to alkyl hydro-peroxide... cl00388 74.648 2.82E-15 1417 - 1508 specific 258177
Thioredoxin_like superfamily Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX... - 74.648 2.82E-15 1417 - 1508 superfamily 260398

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
20922 Not available 239744 260517 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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