PHATRDRAFT_49325 mgc108224 protein (Trans_IPPS_HT)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49325	chr_21	mgc108224 protein (Trans_IPPS_HT)	584833	586063	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0194

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0131	0.25	1300 19000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Trans_IPPS_HT		Trans-Isoprenyl Diphosphate Synthases, head-to-tail; These trans-Isoprenyl Diphosphate Synthases (...	cl00210	224.738	3.32E-71	25 - 341	specific	173833
Isoprenoid_Biosyn_C1 superfamily		Isoprenoid Biosynthesis enzymes, Class 1; Superfamily of trans-isoprenyl diphosphate synthases (...	-	224.738	3.32E-71	25 - 341	superfamily	260263

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
30105		Not available	179912	298851	415987	Cre03.g207700.t1.1	AT4G17190.1	556668

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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