PHATRDRAFT_50157 (ANK)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50157 chr_27 (ANK) 216376 221284 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0216

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 66.6382 1.40E-12 972 - 1100 superfamily 238125
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 66.6382 1.40E-12 972 - 1100 superfamily 238125
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 57.0048 1.62E-09 274 - 371 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 57.0048 1.62E-09 274 - 371 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 57.0048 1.62E-09 274 - 371 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 57.0048 1.62E-09 274 - 371 superfamily 238112
FYVE FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with... cl17764 43.9637 2.13E-05 1393 - 1439 specific 238022
FYVE superfamily FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with... - 43.9637 2.13E-05 1393 - 1439 superfamily 266823
PDZ PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif).... cl00117 41.1369 0.000202052 465 - 539 specific 238080
PDZ superfamily PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif).... - 41.1369 0.000202052 465 - 539 superfamily 260201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
6893 Not available 232892 255215 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments