PHATRDRAFT_50624 cleavage and polyadenylation specific factor 4 (Dev_Cell_Death superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50624 chr_33 cleavage and polyadenylation specific factor 4 (Dev_Cell_Death superfamily) 6033 7844 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0376

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Dev_Cell_Death superfamily Development and cell death domain; The DCD domain is found in plant proteins involved in... - 118.211 3.18E-31 437 - 564 superfamily 245533
YTH superfamily YT521-B-like domain; A protein of the YTH family has been shown to selectively remove transcripts... - 53.7262 8.20E-09 266 - 358 superfamily 252409
ZnF_C3H1 zinc finger; zinc finger. cl11592 42.6165 1.49E-05 183 - 208 specific 214632
zf-CCCH superfamily Zinc finger C-x8-C-x5-C-x3-H type (and similar); Zinc finger C-x8-C-x5-C-x3-H type (and similar). - 42.6165 1.49E-05 183 - 208 superfamily 264437

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
19126 Not available 165242 320463 462691 Cre24.g755647.t1.1 AT1G30460.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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