PHATRDRAFT_52094 rna polymerase i subunit hrpa39 (RNAP_I_II_AC40)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_52094 chr_11 rna polymerase i subunit hrpa39 (RNAP_I_II_AC40) 111632 112673 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0243

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0230
 0.25

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RNAP_I_II_AC40 AC40 subunit of Eukaryotic RNA polymerase (RNAP) I and RNAP III; The eukaryotic AC40 subunit of RNA... cl11409 426.625 3.31E-150 8 - 307 specific 132910
RNAP_RPB11_RPB3 superfamily RPB11 and RPB3 subunits of RNA polymerase; The eukaryotic RPB11 and RPB3 subunits of RNA polymerase... - 426.625 3.31E-150 8 - 307 superfamily 264356
RPOLD RNA polymerases D; DNA-directed RNA polymerase subunit D and bacterial alpha chain - 183.968 2.94E-56 19 - 303 multi-dom 214766

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
42412 Not available 225400 186719 237108 Cre07.g313302.t1.1 AT1G60620.1 356217

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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