PHATRDRAFT_52173 dna mismatch repair protein (MutS)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_52173 chr_12 dna mismatch repair protein (MutS) 547987 549271 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0059

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0138
 0.26

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 221.406 3.15E-70 101 - 308 superfamily 266551
MutS_III MutS domain III; This domain is found in proteins of the MutS family (DNA mismatch repair proteins... cl17822 56.2831 3.28E-09 6 - 79 specific 253074
MutS_III superfamily MutS domain III; This domain is found in proteins of the MutS family (DNA mismatch repair proteins... - 56.2831 3.28E-09 6 - 79 superfamily 266862
Tol_Tol_Ttg2 superfamily Toluene tolerance, Ttg2; Toluene tolerance is mediated by increased cell membrane rigidity... - 35.306 0.00886165 310 - 371 superfamily 260776
MutS Mismatch repair ATPase (MutS family) [DNA replication, recombination, and repair] - 268.769 5.71E-82 6 - 329 multi-dom 223327

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
16039 Not available 149505 183820 70448 Not available AT3G20475.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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