PHATRDRAFT_54935 clathrin coat assembly (APS2)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_54935	chr_18	clathrin coat assembly (APS2)	381034	381632	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0132

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0153	0.26	1400 99000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
APS2		Clathrin adaptor complex, small subunit [Intracellular trafficking and secretion]	cl02092	180.299	3.20E-58	1 - 152	specific	227363
Clat_adaptor_s superfamily		Clathrin adaptor complex small chain; Clathrin adaptor complex small chain.	-	180.299	3.20E-58	1 - 152	superfamily	261170

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
36490		Not available	224557	292673	429503	Cre07.g324600.t1.2	AT1G47830.1	310806

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments