PHATRDRAFT_7072 tata box binding protein-associated factor (COG1936)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_7072 chr_12 tata box binding protein-associated factor (COG1936) 762452 763118 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0294

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0211
 0.25

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COG1936 Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] cl19128 144.377 1.62E-43 5 - 176 specific 224847
AAA_17 superfamily AAA domain; AAA domain. - 144.377 1.62E-43 5 - 176 superfamily 267481
AAA_33 AAA domain; This family of domains contain only a P-loop motif, that is characteristic of the AAA... - 51.5414 2.83E-09 7 - 145 multi-dom 257977

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
32766 Not available 170331 287260 75738 Cre02.g081550.t1.2 AT5G60340.1 336490

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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