PHATRDRAFT_9372 elongation factor ef-3 (Uup)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_9372 chr_1 elongation factor ef-3 (Uup) 1913014 1914525 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0243

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0102
 0.21

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABCF_EF-3 ATP-binding cassette domain of elongation factor 3, subfamily F; Elongation factor 3 (EF-3) is a... cl17201 99.4452 1.30E-24 231 - 504 specific 213188
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 52.0879 6.63E-08 376 - 500 superfamily 266551
ABCF_EF-3 ATP-binding cassette domain of elongation factor 3, subfamily F; Elongation factor 3 (EF-3) is a... cl17201 99.4452 1.30E-24 231 - 504 specific 213188
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 52.0879 6.63E-08 376 - 500 superfamily 266551
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 52.0879 6.63E-08 376 - 500 superfamily 266551
Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction... - 266.809 3.72E-82 1 - 504 multi-dom 223562

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
13884 Not available 259134 306441 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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