10457 Alpha_kinaseThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
10457	chr_16a	Alpha_kinase	387542	388231	+	Alpha_kinase

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450022	Thaps10457.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0102

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0181	0.40	44000 0.00011

Most Highly Correlated Transcripts

3768 hypothetical protein 0.9142	30701 PRK05279 0.8957	1520 hypothetical protein 0.8903	36641 Aldolase_Class_I superfamily 0.8885	8461 hypothetical protein 0.8867	264109 fabG 0.8863
268192 Zip superfamily 0.8836	33919 MPC superfamily 0.8836	268904 hypothetical protein 0.8828	268840 CBS_pair_10 0.8819

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Alpha_kinase		Alpha-kinase family; This family is a novel family of eukaryotic protein kinase catalytic domains,...	cl03728	120.113	2.00E-33	9 - 170	specific	251549
Alpha_kinase superfamily		Alpha-kinase family; This family is a novel family of eukaryotic protein kinase catalytic domains,...	-	120.113	2.00E-33	9 - 170	superfamily	261852

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_47285	PHATRDRAFT_47285	227902	301322	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004674 GO:0005524 GO:0006468 -

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