268840 CBS_pair_10
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268840 chr_5 CBS_pair_10 391738 392616 + CBS_pair_10

Synonyms

NCBI ID Ensembl Genomes exon ID
7451744 Thaps268840.2, Thaps268840.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0211

Most Highly Correlated Transcripts

39299

(ARF3) Arf1_5_like
0.9488

25068

hypothetical protein
0.9337

18462

EMP24_GP25L
0.9336

21249

hypothetical protein
0.9329

25025

PHear_NECAP
0.9275

41697

TRX_family
0.9257

36641

Aldolase_Class_I superfamily
0.9215

22673

NA
0.9207

30701

PRK05279
0.9168

26470

(GFS1) PLN02725
0.9121

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CBS_pair_10 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... cl15354 124.919 1.32E-36 54 - 166 specific 239995
CBS_pair superfamily The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... - 124.919 1.32E-36 54 - 166 superfamily 265675
COG0517 FOG: CBS domain [General function prediction only] - 72.1189 1.63E-16 55 - 164 multi-dom 223591

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47178 PHATRDRAFT_47178 170112 187088 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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