10541 ALDH-SF superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10541 chr_17 ALDH-SF superfamily 12155 14844 + ALDH-SF superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0490

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0059
 0.44

Most Highly Correlated Transcripts

5153

hypothetical protein
0.8659

8510

hypothetical protein
0.852

3310

hypothetical protein
0.8512

3071

NA
0.8392

2660

hypothetical protein
0.8381

26769

ERG4_ERG24 superfamily
0.8326

25212

hypothetical protein
0.8323

3260

hypothetical protein
0.8315

3702

hypothetical protein
0.8314

6949

Peptidase_S41_CPP
0.8308

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ALDH-SF superfamily NAD(P)+-dependent aldehyde dehydrogenase superfamily; The aldehyde dehydrogenase superfamily (ALDH-... - 593.339 0 7 - 485 superfamily 264488

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_54535 PHATRDRAFT_54535 271941 259920 Not available Not available Not available 508370

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0016491 GO:0004491 GO:0006573 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0004491

methylmalonate-semialdehyde dehydrogenase (acylating) activity

Details: 
Catalysis of the reaction: 2-methyl-3-oxopropanoate + CoA + NAD+ = propanoyl-CoA + CO2 + NADH + H+.
GO Category: 
MF

GO:0006573

valine metabolic process

Details: 
The chemical reactions and pathways involving valine, 2-amino-3-methylbutanoic acid.
GO Category: 
BP

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