11199 EEP superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
11199	chr_19a_19	EEP superfamily	415711	418905	+	EEP superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446316	Thaps11199.1, Thaps11199.3, Thaps11199.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0442

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0055	0.46	0.0012 1.3

Most Highly Correlated Transcripts

264854 S_TKc 0.8456	5479 hypothetical protein 0.8456	23603 hypothetical protein 0.8445	2530 hypothetical protein 0.8317	8927 hypothetical protein 0.8248	4781 hypothetical protein 0.8178
262249 hypothetical protein 0.8173	11932 hypothetical protein 0.8163	262378 (FRU1) hypothetical protein 0.8151	31622 MATE_like superfamily 0.8147

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
EEP superfamily		Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; This large superfamily includes the...	-	155.539	3.04E-41	659 - 1013	superfamily	260458

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_45096	PHATRDRAFT_45096	241143	Not available	Not available	Cre12.g500450.t1.1	Not available	560754

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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