11455 EXS
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11455 chr_20 EXS 148974 151199 + EXS

Synonyms

NCBI ID Ensembl Genomes exon ID
7447823 Thaps11455.1, Thaps11455.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0190

Most Highly Correlated Transcripts

38149

Acatn superfamily
0.9059

42946

PTZ00308
0.9044

10774

hypothetical protein
0.9033

4433

hypothetical protein
0.8964

40206

UAA
0.8945

7251

hypothetical protein
0.8927

264002

guanyl nucleotide exchange factor
0.8894

2434

Ion_trans
0.8887

20763

CAF1
0.8849

11387

SEC14
0.8846

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EXS EXS family; We have named this region the EXS family after (ERD1, XPR1, and SYG1). This family... cl03905 172.426 5.40E-48 292 - 581 specific 251742
EXS superfamily EXS family; We have named this region the EXS family after (ERD1, XPR1, and SYG1). This family... - 172.426 5.40E-48 292 - 581 superfamily 261938

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42424 PHATRDRAFT_42424 189574 261103 Not available Not available AT3G29060.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016021 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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