11756 SURF1 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11756 chr_22 SURF1 superfamily 368921 370195 - SURF1 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443861 Thaps11756.2, Thaps11756.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0137

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0048
 0.39

Most Highly Correlated Transcripts

37934

GRX_PICOT_like
0.9197

262994

COG0637
0.897

7469

hypothetical protein
0.8965

26991

GRX_GRXh_1_2_like
0.894

11751

hypothetical protein
0.8917

3661

MMCE
0.888

17214

PLN02512
0.8874

36641

Aldolase_Class_I superfamily
0.8832

9776

hypothetical protein
0.8822

9483

CoAse
0.8819

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SURF1 superfamily SURF1 superfamily. Surf1/Shy1 has been implicated in the posttranslational steps of the biogenesis... - 65.8279 6.27E-13 87 - 360 superfamily 260884

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd1384 PHATRDRAFT_bd1384 206871 185075 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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