17214 PLN02512
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
17214 chr_3 PLN02512 2046230 2047336 - PLN02512

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps17214.2, Thaps17214.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0213

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0178
 0.28

Most Highly Correlated Transcripts

1219

PAP_fibrillin superfamily
0.9281

21978

hypothetical protein
0.9259

11831

hypothetical protein
0.9212

4357

hypothetical protein
0.9192

5872

hypothetical protein
0.9173

35025

Lung_7-TM_R superfamily
0.9129

9776

hypothetical protein
0.9125

19639

Got1 superfamily
0.9115

31535

cyclophilin_ABH_like
0.9098

33343

(PGD1) PLN02350
0.9096

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN02512 acetylglutamate kinase cl00452 405.995 1.62E-141 1 - 322 specific 178128
AAK superfamily Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-... - 405.995 1.62E-141 1 - 322 superfamily 260430

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_3969 PHATRDRAFT_3969 269031 301450 434520 Cre01.g015000.t1.2 AT3G57560.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008652 GO:0004349 GO:0006561 GO:0003991 GO:0005737 GO:0006526 -

GO:0008652

cellular amino acid biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
GO Category: 
BP

GO:0004349

glutamate 5-kinase activity

Details: 
Catalysis of the reaction: L-glutamate + ATP = L-glutamyl 5-phosphate + ADP + H(+).
GO Category: 
MF

GO:0006561

proline biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins.
GO Category: 
BP

GO:0003991

acetylglutamate kinase activity

Details: 
Catalysis of the reaction: ATP + N-acetyl-L-glutamate = ADP + N-acetyl-L-glutamate-5-phosphate.
GO Category: 
MF

GO:0005737

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

GO:0006526

arginine biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
GO Category: 
BP

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