11958 Nuf2 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
11958	chr_22	Nuf2 superfamily	1010727	1013021	+	Nuf2 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448252	Thaps11958.3, Thaps11958.4, Thaps11958.2, Thaps11958.1, Thaps11958.5

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0082

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0292	0.20	160 8100

Most Highly Correlated Transcripts

bd1173 (bd1173) S_TKc 0.9511	2267 hypothetical protein 0.945	2376 PTZ00298 0.9431	7206 hypothetical protein 0.9404	23028 KISc_KIF2_like 0.9399	24220 hypothetical protein 0.933
4170 hypothetical protein 0.9312	32661 ABC_ATPase superfamily 0.9306	bd1983 (bd1983) RecA-like_NTPases superfamily 0.9297	9101 hypothetical protein 0.925

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Nuf2 superfamily		Nuf2 family; Members of this family are components of the mitotic spindle. It has been shown that...	-	78.8052	2.28E-17	6 - 152	superfamily	252172

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_46838	PHATR_46838	198797	319436	444453	Not available	Not available	534042

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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