14655 (met) Rubis-subs-bind
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
14655 chr_1 (met) Rubis-subs-bind 782676 784654 + Rubis-subs-bind

Synonyms

NCBI ID Ensembl Genomes exon ID
7453455 Thaps14655.1, Thaps14655.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0013

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0250
 0.30

Most Highly Correlated Transcripts

270222

0.9672

268592

VDE superfamily
0.8964

261608

PLN02585
0.8823

263714

LPLAT_GPAT
0.8729

574

PRK05444
0.8679

2386

hypothetical protein
0.8649

bd1857

(bd1857) DnaJ
0.8642

21250

hypothetical protein
0.8641

8872

hypothetical protein
0.8579

10185

hypothetical protein
0.8579

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Rubis-subs-bind superfamily Rubisco LSMT substrate-binding; Members of this family adopt a multihelical structure, with an... - 69.2949 6.07E-14 445 - 566 superfamily 255262
Rubis-subs-bind superfamily Rubisco LSMT substrate-binding; Members of this family adopt a multihelical structure, with an... - 69.2949 6.07E-14 445 - 566 superfamily 255262

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46871 PHATRDRAFT_46871 184116 1598 123118 Cre12.g524500.t1.2 AT3G07670.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0030785 -

GO:0030785

[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine + [ribulose-1,5-bisphosphate carboxylase]-lysine = S-adenosyl-L-homocysteine + [ribulose-1,5-bisphosphate carboxylase]-N6-methyl-L-lysine.
GO Category: 
MF

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