15093 Peptidase_S10 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
15093 chr_19c_29 Peptidase_S10 superfamily 66799 68915 + Peptidase_S10 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451871 Thaps15093.2, Thaps15093.3, Thaps15093.1, Thaps15093.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0424

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0249
 0.31

Most Highly Correlated Transcripts

bd410

(bd410) HNHc
0.9376

bd1841

(bd1841) CAP10 superfamily
0.9183

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9172

23779

hypothetical protein
0.9108

41632

Asp
0.8987

20708

MPP_ACP5
0.8972

38360

Peptidase_C1 superfamily
0.893

23047

hypothetical protein
0.8886

36297

pepsin_retropepsin_like superfamily
0.8866

23830

(GCD1) GCD
0.8817

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_S10 superfamily Serine carboxypeptidase; Serine carboxypeptidase. - 469.686 1.99E-160 148 - 581 superfamily 263558

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11204 PHATRDRAFT_11204 212738 325142 424894 Cre06.g279400.t1.2 AT3G45010.1 544689

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0004185 GO:0006508 GO:0004186 GO:0004258 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0004185

serine-type carboxypeptidase activity

Details: 
Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0004186

NA

Details: 
NA
GO Category: 
NA

GO:0004258

NA

Details: 
NA
GO Category: 
NA

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