16082 Solute_trans_aThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
16082	chr_7	Solute_trans_a	325216	327108	-	Solute_trans_a

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448942	Thaps16082.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0132

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0171	0.35	0.00000000000001 1200

Most Highly Correlated Transcripts

bd706 (bd706) NA 0.9129	22850 DUF4239 0.9043	4565 hypothetical protein 0.9	3310 hypothetical protein 0.8972	3842 hypothetical protein 0.8884	21722 Aldo_ket_red 0.8826
5977 hypothetical protein 0.8785	10523 hypothetical protein 0.8772	8415 P4Hc 0.8751	5921 hypothetical protein 0.8744

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Solute_trans_a superfamily		Organic solute transporter Ostalpha; This family is a transmembrane organic solute transport...	-	305.242	1.03E-98	209 - 486	superfamily	252064
Solute_trans_a superfamily		Organic solute transporter Ostalpha; This family is a transmembrane organic solute transport...	-	305.242	1.03E-98	209 - 486	superfamily	252064

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_11183	PHATRDRAFT_11183	269810	170358	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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