1852 UBCc superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
1852	chr_1	UBCc superfamily	2579254	2580263	+	UBCc superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449096	Thaps1852.3, Thaps1852.2, Thaps1852.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0186

Most Highly Correlated Transcripts

6481 hypothetical protein 0.923	8432 TAF7 0.9227	30701 PRK05279 0.9194	10898 hypothetical protein 0.9192	7588 hypothetical protein 0.9186	6997 hypothetical protein 0.9158
24660 hypothetical protein 0.9106	25320 hypothetical protein 0.907	41655 Chloroa_b-bind 0.9009	2855 hypothetical protein 0.9004

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
UBCc superfamily		Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated...	-	59.6152	1.63E-11	39 - 189	superfamily	260221

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_33325	PHATR_33325	267044	295464	Not available	Not available	Not available	480919

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004840 GO:0006464 GO:0006512 GO:0004842 -

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