18954 (APT2) PRTases_typeI
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
18954 chr_7 (APT2) PRTases_typeI 1736657 1737650 + PRTases_typeI

Synonyms

NCBI ID Ensembl Genomes exon ID
7447185 Thaps18954.1, Thaps18954.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0348

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0012
 0.49

Most Highly Correlated Transcripts

20602

Ribosomal_L22 superfamily
0.8347

263682

hypothetical protein
0.8306

19158

GRX_PICOT_like
0.8238

21686

Prefoldin_2
0.8147

36007

Aldolase_II superfamily
0.8109

264556

FBPase
0.8089

268443

SAICAR_synt_Sc
0.8049

3904

DUF3611 superfamily
0.8032

38957

2-oxoacid_dh
0.8018

3718

hypothetical protein
0.799

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PRTases_typeI Phosphoribosyl transferase (PRT)-type I domain; Phosphoribosyl transferase (PRT) domain. The type I... cl00309 92.0736 4.30E-23 125 - 241 specific 206754
PRTases_typeI superfamily Phosphoribosyl transferase (PRT)-type I domain; Phosphoribosyl transferase (PRT) domain. The type I... - 92.0736 4.30E-23 125 - 241 superfamily 260342

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_6834 PHATRDRAFT_6834 235828 185724 57558 Cre17.g704850.t1.2 AT1G80050.1 354258

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0009116 GO:0016740 GO:0031177 GO:0003999 -

GO:0009116

nucleoside metabolic process

Details: 
The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).
GO Category: 
BP

GO:0016740

transferase activity

Details: 
Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
GO Category: 
MF

GO:0031177

phosphopantetheine binding

Details: 
Interacting selectively and non-covalently with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate).
GO Category: 
MF

GO:0003999

adenine phosphoribosyltransferase activity

Details: 
Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate.
GO Category: 
MF

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