19301 sigpep_I_bact
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
19301 chr_5 sigpep_I_bact 1681829 1682413 + sigpep_I_bact
NCBI ID Ensembl Genomes exon ID
7448186 Thaps19301.1, Thaps19301.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0230
Normalized Mean Residue
Thaps_bicluster_0091
0.31
hypothetical protein
0.9075
hypothetical protein
0.8878
hypothetical protein
0.8526
hypothetical protein
0.8517
DUF819 superfamily
0.8391
hypothetical protein
0.8379
pyridoxal_pyridoxamine_kinase
0.8352
COG2319
0.8286
hypothetical protein
0.8243
hypothetical protein
0.8193
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
S26_SPase_I The S26 Type I signal peptidase (SPase; LepB; leader peptidase B; leader peptidase I; EC 3.4.21.89... cl10465 69.5367 3.96E-16 22 - 129 specific 119398
Peptidase_S24_S26 superfamily The S24, S26 LexA/signal peptidase superfamily contains LexA-related and type I signal peptidase... - 69.5367 3.96E-16 22 - 129 superfamily 263975
sigpep_I_bact signal peptidase I, bacterial type; This model represents signal peptidase I from most bacteria.... - 86.5297 9.90E-22 22 - 136 multi-dom 233790
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_10934 PHATRDRAFT_10934 206019 153901 111161 Cre11.g467655.t1.1 AT1G53530.1 511553
KEGG description KEGG Pathway
Protein export map03060
GO:0006508 GO:0008236 GO:0016020 GO:0008233 GO:0008234 -

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

serine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
GO Category: 
MF

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

peptidase activity

Details: 
Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
GO Category: 
MF

cysteine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF
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