20832 HPP
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20832 chr_1 HPP 1516205 1519147 + HPP

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0335

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0109
 0.50

Most Highly Correlated Transcripts

bd1667

(bd1667) Mpp10
0.8667

bd1946

(bd1946) NA
0.8545

bd1877

(bd1877) NA
0.8419

bd1806

(bd1806) AAT_I superfamily
0.8394

bd690

(bd690) NA
0.8271

bd930

(bd930) HA
0.8223

bd1840

(bd1840) NA
0.8192

bd1709

(bd1709) NA
0.8151

bd1934

(bd1934) NA
0.815

bd524

(bd524) NA
0.7967

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HPP superfamily HPP family; These proteins are integral membrane proteins with four transmembrane spanning helices... - 83.294 9.54E-19 441 - 556 superfamily 252920
HPP superfamily HPP family; These proteins are integral membrane proteins with four transmembrane spanning helices... - 83.294 9.54E-19 441 - 556 superfamily 252920

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44732 PHATRDRAFT_44732 Not available 183851 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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