21175 (TKT2) PLN02790
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21175 chr_2 (TKT2) PLN02790 486226 488516 + PLN02790

Synonyms

NCBI ID Ensembl Genomes exon ID
7448665 Thaps21175.2, Thaps21175.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0015

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0288
 0.28

Most Highly Correlated Transcripts

bd1306

(bd1306) NA
0.9814

bd1820

(bd1820) Fasciclin
0.9787

bd1863

(bd1863) NA
0.9776

bd1403

(bd1403) NA
0.9721

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9713

bd1342

(bd1342) psaL
0.9692

bd218

(bd218) Chloroa_b-bind superfamily
0.9688

bd1387

(bd1387) psbE
0.9651

bd1645

(bd1645) tpt
0.9645

bd1304

(bd1304) Ycf4
0.9635

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes... cl01629 341.021 4.80E-112 39 - 295 specific 238970
TPP_enzymes superfamily Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes... - 341.021 4.80E-112 39 - 295 superfamily 261022
TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK... cl11410 172.626 2.78E-50 390 - 552 specific 132916
TPP_enzyme_PYR superfamily Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes; Thiamine... - 172.626 2.78E-50 390 - 552 superfamily 264357
PLN02790 transketolase - 1020.72 0 39 - 690 multi-dom 215424

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_41856 PHATRDRAFT_41856 279206 317336 437959 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004802 -

GO:0004802

transketolase activity

Details: 
Catalysis of the reversible transfer of a 2-carbon ketol group (CH2OH-CO-) from a ketose phosphate donor to an aldose phosphate acceptor.
GO Category: 
MF

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