2157 D123 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
2157	chr_2	D123 superfamily	319233	320431	-	D123 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452199	Thaps2157.2, Thaps2157.1, Thaps2157.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0230

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0226	0.29	0.13 0.0017

Most Highly Correlated Transcripts

bd524 (bd524) NA 0.9218	31516 SIK1 0.908	26678 (TKT1) PLN02790 0.9057	bd1807 (bd1807) RRS1 superfamily 0.9029	268130 hypothetical protein 0.8968	22036 ElaC 0.8967
5532 hypothetical protein 0.8959	16287 Pkinase 0.895	34413 RRM_ABT1_like 0.892	22356 PseudoU_synth_ScPUS7 0.8902

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
D123 superfamily		D123; This family contains a number of eukaryotic D123 proteins approximately 330 residues long. It...	-	228.749	5.75E-72	79 - 361	superfamily	254043

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_11084	PHATRDRAFT_11084	206381	203948	115862	Not available	AT4G05440.1	528425

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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