21855 DUF1336 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21855 chr_3 DUF1336 superfamily 1459108 1462445 + DUF1336 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451292 Thaps21855.1, Thaps21855.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0108

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0019
 0.40

Most Highly Correlated Transcripts

269593

(RPT4) RPT1
0.8696

bd453

(bd453) Mito_carr
0.8635

6950

prc
0.8631

10340

hypothetical protein
0.8593

22857

hypothetical protein
0.8578

38991

COG1565
0.8573

4333

hypothetical protein
0.8542

5586

Prenylcys_lyase superfamily
0.8507

25297

Chorein_N
0.8499

24686

hypothetical protein
0.8478

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF1336 superfamily Protein of unknown function (DUF1336); This family represents the C-terminus (approximately 250... - 84.6654 3.30E-18 757 - 1018 superfamily 254039

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44591 PHATRDRAFT_44591 242068 144621 Not available Not available AT5G39430.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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