21956 GcvR
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21956 chr_3 GcvR 1920004 1923864 + GcvR

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0148

Most Highly Correlated Transcripts

31777

(OCT1) CoA_trans superfamily
0.8821

261400

NA
0.8759

2771

hypothetical protein
0.8752

bd392

(bd392) DEXDc
0.8664

268257

fabG
0.8662

269624

TIM_phosphate_binding superfamily
0.8647

6698

hypothetical protein
0.8645

11439

hypothetical protein
0.862

1137

hypothetical protein
0.8609

3093

hypothetical protein
0.8581

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GcvR Glycine cleavage system regulatory protein [Amino acid transport and metabolism] - 72.4078 2.43E-14 237 - 405 multi-dom 225337

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42571 PHATRDRAFT_42571 255265 254171 111890 Cre02.g115150.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0016597 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016597

amino acid binding

Details: 
Interacting selectively and non-covalently with an amino acid, organic acids containing one or more amino substituents.
GO Category: 
MF

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