2215 SOULThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
2215	chr_2	SOUL	462835	463993	-	SOUL

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442249	Thaps2215.2, Thaps2215.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0123

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0044	0.46

Most Highly Correlated Transcripts

bd1959 (bd1959) NA 0.8895	2824 PRK13759 0.845	9438 hypothetical protein 0.844	20906 hypothetical protein 0.8437	6542 hypothetical protein 0.8331	3146 hypothetical protein 0.8269
bd635 (bd635) NA 0.824	2019 hypothetical protein 0.8106	23148 PUB 0.8089	35133 (SIT3) Silic_transp 0.8071

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SOUL superfamily		SOUL heme-binding protein; This family represents a group of putative heme-binding proteins. Our...	-	141.624	3.67E-40	193 - 371	superfamily	252825
SOUL superfamily		SOUL heme-binding protein; This family represents a group of putative heme-binding proteins. Our...	-	141.624	3.67E-40	193 - 371	superfamily	252825

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_37136	PHATRDRAFT_37136	240216	151924	Not available	Cre06.g304400.t1.1	AT3G10130.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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