22280 Ntn_hydrolase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22280 chr_4 Ntn_hydrolase superfamily 1175714 1176814 - Ntn_hydrolase superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7446086 Thaps22280.2, Thaps22280.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0174

Most Highly Correlated Transcripts

7085

PI-PLCc_GDPD_SF superfamily
0.9086

4512

hypothetical protein
0.9053

5635

hypothetical protein
0.9044

9174

DUF563
0.9022

22677

hypothetical protein
0.9019

3966

PT_UbiA superfamily
0.9017

261894

(Tp_Myb4R2) MYB DNA binding protein/ transcription factor-like protein
0.8968

21681

hypothetical protein
0.8945

5038

DUF179
0.8913

11187

hypothetical protein
0.8913

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ntn_hydrolase superfamily The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are... - 118.963 1.28E-31 46 - 218 superfamily 260443

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd206 PHATRDRAFT_bd206 165861 159762 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Proteasome map03050

GO Terms

GO:0004298 GO:0005839 GO:0006511 GO:0004299 -

GO:0004298

threonine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0005839

proteasome core complex

Details: 
A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex.
GO Category: 
CC

GO:0006511

ubiquitin-dependent protein catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO Category: 
BP

GO:0004299

NA

Details: 
NA
GO Category: 
NA

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