22749 DUF647 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
22749	chr_5	DUF647 superfamily	1234073	1236281	-	DUF647 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450081	Thaps22749.3, Thaps22749.2, Thaps22749.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0287

Most Highly Correlated Transcripts

6028 NA 0.927	38149 Acatn superfamily 0.9194	260850 (KE4) Zip 0.903	267979 HCO3_cotransp superfamily 0.9015	21723 DnaJ 0.9013	268443 SAICAR_synt_Sc 0.8948
23550 hypothetical protein 0.8944	4433 hypothetical protein 0.8941	20712 hypothetical protein 0.8935	30701 PRK05279 0.8923

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF647 superfamily		Vitamin B6 photo-protection and homoeostasis; In plants, this domain plays a role in auxin-...	-	170.537	2.64E-48	167 - 442	superfamily	252855

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_50103	PHATRDRAFT_50103	160926	203287	Not available	Cre09.g396050.t1.1	AT5G49820.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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