22886 CLU
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22886 chr_5 CLU 1927653 1932832 - CLU

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0239

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0291
 0.48

Most Highly Correlated Transcripts

bd1709

(bd1709) NA
0.9205

bd96

(bd96) eIF-3_zeta
0.8883

bd1876

(bd1876) NatB_MDM20 superfamily
0.8691

32395

RNA_pol
0.8593

41953

RtcB
0.8525

24201

hypothetical protein
0.8426

26492

PRK05385
0.8339

13308

PLN02948
0.8307

23306

hypothetical protein
0.8293

bd1667

(bd1667) Mpp10
0.8286

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CLU superfamily Clustered mitochondria; The CLU domain (CLUstered mitochondria) is a eukaryotic domain found in... - 313.008 2.77E-97 661 - 886 superfamily 257593
CLU superfamily Clustered mitochondria; The CLU domain (CLUstered mitochondria) is a eukaryotic domain found in... - 313.008 2.77E-97 661 - 886 superfamily 257593
eIF3_p135 superfamily Translation initiation factor eIF3 subunit 135; Translation initiation factor eIF3 is a multi-... - 160.226 2.85E-44 1055 - 1257 superfamily 257314
eIF3_p135 superfamily Translation initiation factor eIF3 subunit 135; Translation initiation factor eIF3 is a multi-... - 160.226 2.85E-44 1055 - 1257 superfamily 257314

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43732 PHATRDRAFT_43732 180781 253640 Not available Not available AT3G52140.2 359947

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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