22963 WD40 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22963 chr_6 WD40 superfamily 198155 201959 + WD40 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0208

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0231
 0.32

Most Highly Correlated Transcripts

25077

hypothetical protein
0.9143

2575

RIO superfamily
0.9068

bd1662

(bd1662) TIGR00367
0.9058

23973

BT1
0.905

4160

PMT_2 superfamily
0.9048

33766

ATPase-IIA2_Ca
0.9019

15464

PCI
0.9017

21681

hypothetical protein
0.9007

20922

Sec10 superfamily
0.9005

2145

hypothetical protein
0.9

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 120.903 9.09E-30 13 - 307 superfamily 238121
ACE1-Sec16-like superfamily Ancestral coatomer element 1 (ACE1) of COPII coat complex assembly protein Sec16; COPII coat... - 75.372 7.91E-15 499 - 702 superfamily 265457
COG2319 FOG: WD40 repeat [General function prediction only] - 98.6223 8.91E-22 83 - 318 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47010 PHATRDRAFT_47010 261735 253120 459051 Cre12.g522450.t1.2 AT1G18830.1 322106

KEGG

KEGG description KEGG Pathway
Protein processing in endoplasmic reticulum map04141

GO Terms

GO:0004806 -

GO:0004806

triglyceride lipase activity

Details: 
Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate.
GO Category: 
MF

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