23105 Peptidase_S74Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
23105	chr_6	Peptidase_S74	885158	891826	+	Peptidase_S74

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443627	Thaps23105.4, Thaps23105.5, Thaps23105.1, Thaps23105.6, Thaps23105.2, Thaps23105.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0230

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0147	0.38	0.21 17000

Most Highly Correlated Transcripts

25539 hypothetical protein 0.9057	3009 hypothetical protein 0.8972	10533 hypothetical protein 0.8937	268746 SXM1 0.8896	25321 hypothetical protein 0.876	24231 C2 superfamily 0.8755
24015 Urb2 superfamily 0.8725	262858 (IKI3) IKI3 0.8676	264090 AAA_12 0.8674	24445 hypothetical protein 0.8659

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Peptidase_S74 superfamily		Chaperone of endosialidase; This is the very C-terminal, chaperone, domain of the bacteriophage...	-	63.7748	6.16E-12	1900 - 1969	superfamily	258151
Peptidase_S74 superfamily		Chaperone of endosialidase; This is the very C-terminal, chaperone, domain of the bacteriophage...	-	63.7748	6.16E-12	1900 - 1969	superfamily	258151
MMS19_N superfamily		Dos2-interacting transcription regulator of RNA-Pol-II; This domain, along with the C-terminal part...	-	64.5263	3.56E-11	343 - 489	superfamily	258640

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_47017	PHATRDRAFT_47017	Not available	284769	Not available	Not available	Not available	314310

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005509 -

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