2318 BromodomainThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
2318	chr_2	Bromodomain	700833	702242	-	Bromodomain

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446503	Thaps2318.1, Thaps2318.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0323

Most Highly Correlated Transcripts

268443 SAICAR_synt_Sc 0.9307	40200 TRX_reduct 0.922	267979 HCO3_cotransp superfamily 0.9214	261019 HECTc 0.9197	38472 HA2 0.9165	20659 hypothetical protein 0.9162
36007 Aldolase_II superfamily 0.9123	19158 GRX_PICOT_like 0.9111	261324 PLN02724 0.9092	19928 (RL20) Ribosomal_L20 0.9068

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Bromodomain		Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone...	cl02556	85.1166	3.77E-20	325 - 429	specific	99922
Bromodomain superfamily		Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone...	-	85.1166	3.77E-20	325 - 429	superfamily	261339

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_47334	PHATRDRAFT_47334	230215	168562	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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