24241 OTU
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24241 chr_10 OTU 947467 949196 + OTU

Synonyms

NCBI ID Ensembl Genomes exon ID
7446919 Thaps24241.2, Thaps24241.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0457

Most Highly Correlated Transcripts

40200

TRX_reduct
0.913

13448

Sec1
0.9085

261400

NA
0.8815

35136

NA
0.8807

12836

EEP superfamily
0.88

16114

PLN02350
0.8661

268443

SAICAR_synt_Sc
0.862

267979

HCO3_cotransp superfamily
0.8619

16295

FBPase
0.8599

269437

EF hand-containing protein
0.8594

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
OTU OTU-like cysteine protease; This family is comprised of a group of predicted cysteine proteases,... cl19932 60.1732 3.33E-11 172 - 289 specific 251233
OTU superfamily OTU-like cysteine protease; This family is comprised of a group of predicted cysteine proteases,... - 60.1732 3.33E-11 172 - 289 superfamily 268285

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47866 PHATRDRAFT_47866 269851 170290 120387 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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