24414 (MAP2) PTZ00053
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24414 chr_12 (MAP2) PTZ00053 87155 89110 + PTZ00053

Synonyms

NCBI ID Ensembl Genomes exon ID
7443230 Thaps24414.2, Thaps24414.1, Thaps24414.3, Thaps24414.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0050

Most Highly Correlated Transcripts

40200

TRX_reduct
0.907

21044

hypothetical protein
0.8918

20750

hypothetical protein
0.8876

12836

EEP superfamily
0.887

33454

Ac_CoA_lig_AcsA
0.8819

267979

HCO3_cotransp superfamily
0.8761

23667

hypothetical protein
0.8758

20627

DEXDc
0.8741

22627

hypothetical protein
0.8738

2897

NGN_Euk
0.8731

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M... cl00279 472.12 3.40E-166 111 - 431 specific 238521
APP_MetAP superfamily A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as... - 472.12 3.40E-166 111 - 431 superfamily 260321
PTZ00053 methionine aminopeptidase 2; Provisional - 677.973 0 53 - 435 multi-dom 240246

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_17304 PHATRDRAFT_17304 277718 190356 427101 Cre16.g652100.t1.2 AT3G59990.4 335348

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008235 GO:0004239 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008235

metalloexopeptidase activity

Details: 
Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0004239

NA

Details: 
NA
GO Category: 
NA

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