2521 Patatin_and_cPLA2 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2521 chr_2 Patatin_and_cPLA2 superfamily 1190658 1191662 + Patatin_and_cPLA2 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7444670 Thaps2521.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0138

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0059
 0.44

Most Highly Correlated Transcripts

26769

ERG4_ERG24 superfamily
0.9016

bd885

(bd885) NA
0.87

263178

(HCD1) NADB_Rossmann superfamily
0.8696

5502

hypothetical protein
0.8693

8324

hypothetical protein
0.8668

2148

DUF1826 superfamily
0.8605

3071

NA
0.8596

22153

DnaJ
0.8578

42646

PRK04342
0.8563

8510

hypothetical protein
0.8555

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Patatin_and_cPLA2 superfamily Patatins and Phospholipases; Patatin-like phospholipase. This family consists of various patatin... - 127.84 9.11E-35 10 - 302 superfamily 264349

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43678 PHATRDRAFT_43678 240924 16110 443890 Cre12.g530950.t1.1 AT1G33270.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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