25468 Methyltransf_22Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25468	chr_19a_19	Methyltransf_22	216158	217923	+	Methyltransf_22

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446286	Thaps25468.3, Thaps25468.1, Thaps25468.5, Thaps25468.4, Thaps25468.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0028

Most Highly Correlated Transcripts

36764 PRK05279 0.9389	30701 PRK05279 0.9358	13393 PLN02321 0.9316	262977 NA 0.9229	261400 NA 0.9171	35136 NA 0.9161
33330 DPM1_like 0.8989	4524 DHQS 0.8981	18462 EMP24_GP25L 0.8981	25068 hypothetical protein 0.8972

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Methyltransf_22 superfamily		Methyltransferase domain; This family appears to be a methyltransferase domain.	-	343.096	1.55E-117	65 - 339	superfamily	257709
Methyltransf_22 superfamily		Methyltransferase domain; This family appears to be a methyltransferase domain.	-	343.096	1.55E-117	65 - 339	superfamily	257709

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_48246	PHATRDRAFT_48246	188167	55717	202429	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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